Pushing everything again, accidentally deleted my remote repository
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30
ex5/ex5_3/Makefile
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30
ex5/ex5_3/Makefile
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#
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# use GNU-Compiler tools
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COMPILER=GCC_
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# alternatively from the shell
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# export COMPILER=GCC_
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# or, alternatively from the shell
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# make COMPILER=GCC_
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# use Intel compilers
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#COMPILER=ICC_
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# use PGI compilers
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# COMPILER=PGI_
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SOURCES = main.cpp goldbach.cpp
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OBJECTS = $(SOURCES:.cpp=.o)
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PROGRAM = main.${COMPILER}
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# uncomment the next to lines for debugging and detailed performance analysis
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CXXFLAGS += -g
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LINKFLAGS += -g
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# do not use -pg with PGI compilers
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ifndef COMPILER
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COMPILER=GCC_
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endif
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include ../${COMPILER}default.mk
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46
ex5/ex5_3/goldbach.cpp
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46
ex5/ex5_3/goldbach.cpp
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#include "goldbach.h"
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#include <iostream>
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#include <iterator>
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#include <omp.h>
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size_t single_goldbach(size_t k)
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{
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const std::vector<size_t> relevant_primes = get_primes(k);
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size_t m = relevant_primes.size();
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size_t counter = 0;
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#pragma omp parallel for shared(relevant_primes, m, k) reduction(+:counter)
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for(size_t i = 0; i < m; ++i)
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{
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for(size_t j = i; j < m; ++j)
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{
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if(relevant_primes[i] + relevant_primes[j] == k)
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++counter;
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}
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}
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return counter;
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}
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std::vector<size_t> count_goldbach(size_t n)
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{
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const std::vector<size_t> relevant_primes = get_primes(n);
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size_t m = relevant_primes.size();
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std::vector<size_t> counter_vector(n + 1, 0);
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#pragma omp parallel for shared(relevant_primes, m, n) reduction(VecAdd:counter_vector)
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for(size_t i = 0; i < m; ++i)
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{
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for(size_t j = i; j < m; ++j)
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{
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size_t sum = relevant_primes[i] + relevant_primes[j];
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if(sum <= n)
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++counter_vector[relevant_primes[i] + relevant_primes[j]];
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}
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}
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return counter_vector;
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}
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45
ex5/ex5_3/goldbach.h
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45
ex5/ex5_3/goldbach.h
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#pragma once
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#include "mayer_primes.h"
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#include <cassert>
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#include <vector>
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/**
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This function returns the number of possible decompositions of an integer into a sum of two prime numbers.
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@param[in] k first integer
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@param[out] count number of decompositions
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*/
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size_t single_goldbach(size_t k);
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/**
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This function returns the number of possible decompositions into a sum of two prime numbers of all even integers in the interval [4,n].
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@param[in] n upper integer bound
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@param[out] count_vector vector containing the number of decompositions for a natural number the corresponding index
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*/
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std::vector<size_t> count_goldbach(size_t n);
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/** Vector @p b adds its elements to vector @p a .
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@param[in] a vector
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@param[in] b vector
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@return a+=b componentwise
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*/
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template<class T>
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std::vector<T> &operator+=(std::vector<T> &a, std::vector<T> const &b)
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{
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assert(a.size()==b.size());
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for (size_t k = 0; k < a.size(); ++k) {
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a[k] += b[k];
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}
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return a;
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}
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// Declare the reduction operation in OpenMP for an STL-vector
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// omp_out += omp_in requires operator+=(vector<int> &, vector<int> const &) from above
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// ------------------------------------------------------------
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// https://scc.ustc.edu.cn/zlsc/tc4600/intel/2016.0.109/compiler_c/common/core/GUID-7312910C-D175-4544-99C5-29C12D980744.htm
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// https://gist.github.com/eruffaldi/7180bdec4c8c9a11f019dd0ba9a2d68c
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// https://stackoverflow.com/questions/29633531/user-defined-reduction-on-vector-of-varying-size
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// see also p.74ff in https://www.fz-juelich.de/ias/jsc/EN/AboutUs/Staff/Hagemeier_A/docs-parallel-programming/OpenMP-Slides.pdf
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#pragma omp declare reduction(VecAdd : std::vector<size_t> : omp_out += omp_in) initializer (omp_priv=omp_orig)
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45
ex5/ex5_3/main.cpp
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45
ex5/ex5_3/main.cpp
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#include "goldbach.h"
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#include <algorithm>
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#include <iostream>
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#include <omp.h>
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using namespace std;
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int main()
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{
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cout << "Check: 694 has "<< single_goldbach(694) << " decompositions." << endl << "----------------------------------------" << endl;
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for(size_t n : {10000, 100000, 400000, 1000000, 2000000})
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{
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double t_start = omp_get_wtime();
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auto goldbach_vector = count_goldbach(n);
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auto max_it = max_element(goldbach_vector.begin(), goldbach_vector.end());
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size_t max_number = distance(goldbach_vector.begin(), max_it);
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double t_end = omp_get_wtime() - t_start;
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cout << "The number " << max_number << " has " << *max_it << " decompositions. Duration: " << t_end << endl;
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}
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/*
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###### WITHOUT PARALLELIZATION ######
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The number 9240 has 329 decompositions. Duration: 0.00307696
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The number 99330 has 2168 decompositions. Duration: 0.189839
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The number 390390 has 7094 decompositions. Duration: 1.3042
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The number 990990 has 15594 decompositions. Duration: 5.45034
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The number 1981980 has 27988 decompositions. Duration: 47.1807
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###### WITH PARALLELIZATION ######
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The number 9240 has 329 decompositions. Duration: 0.000734854
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The number 99330 has 2168 decompositions. Duration: 0.0251322
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The number 390390 has 7094 decompositions. Duration: 0.487375
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The number 990990 has 15594 decompositions. Duration: 6.16972
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The number 1981980 has 27988 decompositions. Duration: 31.5699
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*/
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return 0;
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}
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73
ex5/ex5_3/mayer_primes.h
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73
ex5/ex5_3/mayer_primes.h
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#pragma once
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#include <cstring> //memset
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#include <vector>
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//using namespace std;
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/** \brief Determines all prime numbers in interval [2, @p max].
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*
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* The sieve of Eratosthenes is used.
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*
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* The implementation originates from <a href="http://code.activestate.com/recipes/576559-fast-prime-generator/">Florian Mayer</a>.
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*
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* \param[in] max end of interval for the prime number search.
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* \return vector of prime numbers @f$2,3,5, ..., p<=max @f$.
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*
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* \copyright
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* Copyright (c) 2008 Florian Mayer (adapted by Gundolf Haase 2018)
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*
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* Permission is hereby granted, free of charge, to any person obtaining a copy
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* of this software and associated documentation files (the "Software"), to deal
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* in the Software without restriction, including without limitation the rights
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* to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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* copies of the Software, and to permit persons to whom the Software is
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* furnished to do so, subject to the following conditions:
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*
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* The above copyright notice and this permission notice shall be included in
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* all copies or substantial portions of the Software.
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*
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* THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED,
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* INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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* FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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* AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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* LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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* OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
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*
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*/
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template <class T>
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std::vector<T> get_primes(T max)
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{
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std::vector<T> primes;
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char *sieve;
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sieve = new char[max / 8 + 1];
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// Fill sieve with 1
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memset(sieve, 0xFF, (max / 8 + 1) * sizeof(char));
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for (T x = 2; x <= max; x++)
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{
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if (sieve[x / 8] & (0x01 << (x % 8))) {
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primes.push_back(x);
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// Is prime. Mark multiplicates.
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for (T j = 2 * x; j <= max; j += x)
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{
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sieve[j / 8] &= ~(0x01 << (j % 8));
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}
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}
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}
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delete[] sieve;
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return primes;
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}
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//---------------------------------------------------------------
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//int main() // by Florian Mayer
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//{g++ -O3 -std=c++14 -fopenmp main.cpp && ./a.out
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// vector<unsigned long> primes;
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// primes = get_primes(10000000);
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// // return 0;
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// // Print out result.
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// vector<unsigned long>::iterator it;
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// for(it=primes.begin(); it < primes.end(); it++)
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// cout << *it << " ";
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//
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// cout << endl;
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// return 0;
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//}
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