The following settings should be placed at the end of the ~/.bashrc file in your home directory on mephisto:
# CUDA
export PATH=$PATH:/share/apps/cuda-7.0/bin
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/share/apps/cuda-7.0/lib64
# Intel Compiler
source /share/apps/intel/bin/iccvars.sh intel64
source /share/apps/intel/bin/ifortvars.sh intel64
source /share/apps/intel/vtune_amplifier_xe/amplxe-vars.sh
intel64 > /dev/null
source /share/apps/intel/inspector_xe/inspxe-vars.sh intel64
> /dev/null/dev/null
source /opt/intel/advisor_xe/advixe-vars.sh intel64 >
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:composer_xe_2015.2.164/compiler/lib/intel64
# INTEL MIC (finding runtime libraries for native code on
MIC)
export INTEL_ROOT=/opt/intel/composer_xe_2015.2.164
source $INTEL_ROOT/bin/compilervars.sh intel64
source /opt/intel/vtune_amplifier_xe_2013/amplxe-vars.sh
export MKLROOT=$INTEL_ROOT/mkl
export
SINK_LD_LIBRARY_PATH=$INTEL_ROOT/compiler/lib/mic:$MKLROOT/lib/mic
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$INTEL_ROOT/compiler/lib/intel64:$MKLROOT/lib/intel64
export MIC_LD_LIBRARY_PATH=$INTEL_ROOT/compiler/lib/mic:$MKLROOT/lib/mic
# PGI
export PATH=/share/apps/pgi/linux86-64/2016/bin:$PATH
export MANPATH=$MANPATH:/share/apps/pgi/linux86-64/2016/man
export
LM_LICENSE_FILE=$LM_LICENSE_FILE:/share/apps/pgi/license.dat
# PGI MPICH (only if MPI from PGI is used !
)
export PATH=/share/apps/pgi/linux86-64/2015
export MANPATH=$MANPATH:/share/apps/pgi/linux86-64/2015
# git
# https://143.50.47.112:8443/
git config --global http.sslVerify false
git config --global user.email
gundolf.haase@uni-graz.at
# y o u r email
address
git config --global user.name "Gundolf
Haase"
# y o u r name
git config --global push.default simple
How to start jobs on the compute node, see also wiki
for mephisto, pbs
tutorial, quick:
Tesla cards on compute-0-5
Xeon Phi on compute-0-6
Batch system on mephisto (5 nodes with 2 Xeon 2.67 GHz [2x6 cores], 96 GB memory each): 128
qsub mephisto_simple_cpu.shmephisto_simple_cpu.sh.o<job-ID>qsub mephisto_adv_cpu.shmephisto_adv_cpu.sh.o<job-ID>